Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 GAPDHP69-201ENST00000425504 1008 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3AP84243 AL354983.1-201ENST00000434580 906 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3AP84243 AC021074.2-201ENST00000468434 172 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 RN7SL456P-201ENST00000469290 295 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 AC096743.1-201ENST00000485172 319 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 OR4A21P-201ENST00000532759 944 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 AC103855.4-201ENST00000533158 265 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
H3F3AP84243 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 FXNP1-201ENST00000555153 337 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 PRELID3BP3-201ENST00000584963 545 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3AP84243 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.27□□□□□ -1.41
H3F3AP84243 AC245407.2-201ENST00000614199 451 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 AC026108.1-201ENST00000635444 547 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 AC079178.2-201ENST00000439323 1624 ntBASIC6.27□□□□□ -1.41
H3F3AP84243 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3AP84243 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3AP84243 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3AP84243 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3AP84243 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3AP84243 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
H3F3AP84243 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
H3F3AP84243 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 AC129502.1-201ENST00000623261 1654 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 CDY19P-201ENST00000411668 1613 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 CDY18P-201ENST00000438294 1609 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 OR2AH1P-202ENST00000641232 2744 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 AC015871.3-201ENST00000618835 2261 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 RPL12P13-201ENST00000310055 497 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
H3F3AP84243 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 PPIAP23-201ENST00000420099 497 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 FECHP1-201ENST00000431896 1214 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 AC114402.2-201ENST00000432760 643 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 PSMA6P2-201ENST00000457574 686 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 RPS14P8-201ENST00000478778 369 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 RPL21P42-201ENST00000488408 464 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 RNA5SP75-201ENST00000516841 111 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 IGLVV-66-201ENST00000523818 341 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3AP84243 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3AP84243 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3AP84243 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3AP84243 RN7SL689P-201ENST00000577215 297 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3AP84243 AC111186.1-201ENST00000604684 130 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 MIR665-201ENST00000635949 72 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 AC183089.2-201ENST00000637931 916 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
H3F3AP84243 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 DDX43P1-201ENST00000510713 1763 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 AC110716.2-201ENST00000563865 3945 ntBASIC6.26□□□□□ -1.41
H3F3AP84243 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
H3F3AP84243 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
H3F3AP84243 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3AP84243 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
H3F3AP84243 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
H3F3AP84243 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3AP84243 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3AP84243 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms