Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CRADD-211ENST00000552983 839 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 AC018558.5-201ENST00000565840 952 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 RPS7P1-201ENST00000571702 585 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 PRR13P5-201ENST00000596581 442 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AC091193.1-201ENST00000604640 448 ntBASIC4.82□□□□□ -1.64
RPL39P62891 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 AL354718.1-201ENST00000619764 589 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AC211433.3-201ENST00000623770 375 ntBASIC4.82□□□□□ -1.64
RPL39P62891 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 DOCK11P1-201ENST00000553480 5932 ntBASIC4.82□□□□□ -1.64
RPL39P62891 MAPK10-270ENST00000641102 3538 ntBASIC4.82□□□□□ -1.64
RPL39P62891 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 AL356361.1-201ENST00000400943 1459 ntBASIC4.81□□□□□ -1.64
RPL39P62891 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 AC087392.3-202ENST00000358446 1754 ntBASIC4.81□□□□□ -1.64
RPL39P62891 EEF1A1P20-201ENST00000514852 1386 ntBASIC4.81□□□□□ -1.64
RPL39P62891 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 TMED5-201ENST00000370280 750 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 AC096537.2-201ENST00000413707 714 ntBASIC4.81□□□□□ -1.64
RPL39P62891 AC017104.2-201ENST00000417000 321 ntBASIC4.81□□□□□ -1.64
RPL39P62891 RPSAP1-201ENST00000421328 880 ntBASIC4.81□□□□□ -1.64
RPL39P62891 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 MYO5BP3-201ENST00000431872 1279 ntBASIC4.81□□□□□ -1.64
RPL39P62891 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 CYP2C56P-201ENST00000440076 291 ntBASIC4.81□□□□□ -1.64
RPL39P62891 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.81□□□□□ -1.64
RPL39P62891 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 AP000805.1-201ENST00000471604 784 ntBASIC4.81□□□□□ -1.64
RPL39P62891 AC117395.1-201ENST00000487390 403 ntBASIC4.81□□□□□ -1.64
RPL39P62891 RN7SL516P-201ENST00000496127 297 ntBASIC4.81□□□□□ -1.64
RPL39P62891 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 RPL37-205ENST00000509877 637 ntTSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 RNA5SP116-201ENST00000516132 98 ntBASIC4.81□□□□□ -1.64
RPL39P62891 AC122713.1-201ENST00000518368 1015 ntBASIC4.81□□□□□ -1.64
RPL39P62891 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC4.81□□□□□ -1.64
RPL39P62891 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.81□□□□□ -1.64
RPL39P62891 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC4.81□□□□□ -1.64
RPL39P62891 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC4.81□□□□□ -1.64
RPL39P62891 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC4.81□□□□□ -1.64
RPL39P62891 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 AP001554.1-201ENST00000604533 376 ntBASIC4.81□□□□□ -1.64
RPL39P62891 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 AC119674.1-209ENST00000642031 997 ntBASIC4.81□□□□□ -1.64
RPL39P62891 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
RPL39P62891 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 FOLH1B-202ENST00000529567 2145 ntBASIC4.81□□□□□ -1.64
RPL39P62891 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPL39P62891 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.81□□□□□ -1.64
RPL39P62891 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC4.81□□□□□ -1.64
RPL39P62891 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RPL39P62891 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 AC129502.1-201ENST00000623261 1654 ntBASIC4.8□□□□□ -1.64
RPL39P62891 AC007485.2-201ENST00000623493 1667 ntBASIC4.8□□□□□ -1.64
RPL39P62891 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC4.8□□□□□ -1.64
RPL39P62891 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPL39P62891 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.8□□□□□ -1.64
RPL39P62891 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPL39P62891 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms