Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 AC093297.3-201ENST00000607056 2517 ntBASIC7.55□□□□□ -1.2
SSR1P43307 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SSR1P43307 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
SSR1P43307 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SSR1P43307 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 AC061975.5-201ENST00000584928 1441 ntBASIC7.55□□□□□ -1.2
SSR1P43307 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SSR1P43307 RNU1-38P-201ENST00000362817 144 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.55□□□□□ -1.2
SSR1P43307 AC009237.9-201ENST00000414800 347 ntBASIC7.55□□□□□ -1.2
SSR1P43307 TAS2R2P-201ENST00000421146 910 ntBASIC7.55□□□□□ -1.2
SSR1P43307 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 GSTA6P-201ENST00000424144 582 ntBASIC7.55□□□□□ -1.2
SSR1P43307 CYP4F32P-201ENST00000426492 504 ntBASIC7.55□□□□□ -1.2
SSR1P43307 MORF4L1P5-201ENST00000433352 961 ntBASIC7.55□□□□□ -1.2
SSR1P43307 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.55□□□□□ -1.2
SSR1P43307 FTH1P8-201ENST00000498161 514 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.55□□□□□ -1.2
SSR1P43307 AC117383.2-201ENST00000514722 322 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.55□□□□□ -1.2
SSR1P43307 EGLN3P1-201ENST00000541727 720 ntBASIC7.55□□□□□ -1.2
SSR1P43307 MIR3135A-201ENST00000578460 77 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC009955.2-201ENST00000597288 542 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC007262.1-201ENST00000604099 321 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC023513.1-201ENST00000604396 691 ntBASIC7.55□□□□□ -1.2
SSR1P43307 AC122710.3-201ENST00000606566 541 ntBASIC7.55□□□□□ -1.2
SSR1P43307 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 CASC19-232ENST00000641480 1244 ntBASIC7.55□□□□□ -1.2
SSR1P43307 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SSR1P43307 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SSR1P43307 AC015871.3-201ENST00000618835 2261 ntBASIC7.55□□□□□ -1.2
SSR1P43307 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.55□□□□□ -1.2
SSR1P43307 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.55□□□□□ -1.2
SSR1P43307 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SSR1P43307 AC079178.2-201ENST00000439323 1624 ntBASIC7.55□□□□□ -1.2
SSR1P43307 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.55□□□□□ -1.2
SSR1P43307 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 AL136298.2-201ENST00000556497 1570 ntBASIC7.54□□□□□ -1.2
SSR1P43307 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.54□□□□□ -1.2
SSR1P43307 RNA5SP301-201ENST00000362537 121 ntBASIC7.54□□□□□ -1.2
SSR1P43307 RN7SKP186-201ENST00000365371 303 ntBASIC7.54□□□□□ -1.2
SSR1P43307 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SSR1P43307 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SSR1P43307 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.54□□□□□ -1.2
SSR1P43307 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.54□□□□□ -1.2
SSR1P43307 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.54□□□□□ -1.2
SSR1P43307 AL390728.3-201ENST00000452704 270 ntBASIC7.54□□□□□ -1.2
SSR1P43307 PSPC1P2-201ENST00000455130 225 ntBASIC7.54□□□□□ -1.2
SSR1P43307 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.54□□□□□ -1.2
SSR1P43307 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.54□□□□□ -1.2
SSR1P43307 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.54□□□□□ -1.2
SSR1P43307 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.54□□□□□ -1.2
SSR1P43307 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.54□□□□□ -1.2
SSR1P43307 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.54□□□□□ -1.2
SSR1P43307 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.54□□□□□ -1.2
SSR1P43307 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.54□□□□□ -1.2
SSR1P43307 AC012181.2-201ENST00000570210 699 ntBASIC7.54□□□□□ -1.2
SSR1P43307 AC023389.2-201ENST00000580031 955 ntBASIC7.54□□□□□ -1.2
SSR1P43307 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.54□□□□□ -1.2
SSR1P43307 AC125494.2-201ENST00000602431 657 ntBASIC7.54□□□□□ -1.2
SSR1P43307 AC104184.1-201ENST00000607513 721 ntBASIC7.54□□□□□ -1.2
SSR1P43307 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.54□□□□□ -1.2
SSR1P43307 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SSR1P43307 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.54□□□□□ -1.2
SSR1P43307 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.54□□□□□ -1.2
SSR1P43307 OR2A3P-202ENST00000641249 1776 ntBASIC7.54□□□□□ -1.2
SSR1P43307 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SSR1P43307 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.53□□□□□ -1.2
SSR1P43307 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SSR1P43307 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms