Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 RNA5SP355-201ENST00000365317 135 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC074375.1-201ENST00000372993 192 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 PPIAP26-201ENST00000377951 522 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.61□□□□□ -1.19
UBE4BO95155 AC009362.1-201ENST00000427253 406 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC018804.1-201ENST00000430381 618 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC239800.1-201ENST00000442049 719 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.61□□□□□ -1.19
UBE4BO95155 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 RPS4XP19-201ENST00000460237 736 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 RN7SL705P-201ENST00000481678 294 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 RPL21P42-201ENST00000488408 464 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 RPL7L1P7-201ENST00000509986 724 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 SUMO2P7-201ENST00000511179 285 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 OR10J9P-201ENST00000511932 987 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC106800.2-201ENST00000514009 1103 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.61□□□□□ -1.19
UBE4BO95155 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.61□□□□□ -1.19
UBE4BO95155 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 FXYD6P1-201ENST00000604857 285 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC012629.3-201ENST00000623397 328 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 AC017037.4-201ENST00000624526 826 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 AC084782.1-201ENST00000564401 2465 ntBASIC7.61□□□□□ -1.19
UBE4BO95155 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
UBE4BO95155 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.61□□□□□ -1.19
UBE4BO95155 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.61□□□□□ -1.19
UBE4BO95155 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
UBE4BO95155 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
UBE4BO95155 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC093844.1-201ENST00000514910 1361 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.6□□□□□ -1.19
UBE4BO95155 RNA5SP302-201ENST00000364896 100 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 MIR640-201ENST00000385086 96 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 RNU1-56P-201ENST00000391303 164 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 RN7SKP137-201ENST00000411074 307 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 RPSAP60-201ENST00000415403 880 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.6□□□□□ -1.19
UBE4BO95155 PPIAP23-201ENST00000420099 497 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC009518.3-201ENST00000438972 253 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 RN7SL456P-201ENST00000469290 295 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 IGKV1D-32-201ENST00000517449 318 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC103855.4-201ENST00000533158 265 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 AC090241.1-201ENST00000587732 621 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.6□□□□□ -1.19
UBE4BO95155 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.6□□□□□ -1.19
UBE4BO95155 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 AC120057.5-201ENST00000623840 154 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 AC093909.6-201ENST00000624757 775 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 AC005839.1-201ENST00000624148 3213 ntBASIC7.6□□□□□ -1.19
UBE4BO95155 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
UBE4BO95155 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
UBE4BO95155 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
UBE4BO95155 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.6□□□□□ -1.19
UBE4BO95155 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
UBE4BO95155 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
UBE4BO95155 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.59□□□□□ -1.19
UBE4BO95155 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
UBE4BO95155 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE4BO95155 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE4BO95155 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.59□□□□□ -1.19
UBE4BO95155 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.59□□□□□ -1.19
UBE4BO95155 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
UBE4BO95155 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms