Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 RNU2-5P-201ENST00000410533 180 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 OR5P4P-201ENST00000424698 917 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AL121916.1-201ENST00000429405 308 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 PHBP4-201ENST00000437447 837 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 RPSAP7-201ENST00000456871 885 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AP005202.1-201ENST00000489915 867 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SL775P-201ENST00000498361 336 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC097460.2-201ENST00000511857 741 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC106800.2-201ENST00000514009 1103 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 SNORA81.2-201ENST00000516868 170 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC073581.1-201ENST00000519036 575 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC011611.6-201ENST00000547483 255 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 NDUFA3P4-201ENST00000560814 250 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC006116.6-201ENST00000593258 1103 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 BX005040.2-201ENST00000620504 370 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC211433.3-201ENST00000623770 375 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC100810.3-201ENST00000633189 2240 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC004014.2-201ENST00000623718 5122 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AL022323.4-201ENST00000623980 13120 ntBASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 AC007406.5-201ENST00000570140 3170 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 MED6-212ENST00000615788 1700 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC226101.1-201ENST00000401483 387 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SKP39-201ENST00000410773 322 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 RPSAP1-201ENST00000421328 880 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 PRDX1P1-201ENST00000449329 596 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC008620.1-201ENST00000468453 592 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SL306P-201ENST00000492941 296 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC233290.1-201ENST00000553021 1186 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC061975.3-201ENST00000583209 244 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms