Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 HSP90AB2P-201ENST00000507090 2176 ntBASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 LINC02128-205ENST00000641755 1334 ntBASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC6.49□□□□□ -1.37
SSBP3Q9BWW4 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC104083.1-201ENST00000569449 2615 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 CDYLP1-201ENST00000419017 1458 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC023818.2-201ENST00000623817 2304 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 EEF1A1P3-201ENST00000417549 1385 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL080312.1-201ENST00000256654 824 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RNA5SP483-201ENST00000363431 118 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RNA5SP161-201ENST00000363871 115 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RNA5SP427-201ENST00000365323 119 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RNU6-298P-201ENST00000390888 96 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RNA5SP18-201ENST00000390935 121 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC092952.1-201ENST00000397646 1209 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 NFU1P1-201ENST00000413128 774 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 IFNA12P-201ENST00000413147 571 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RPL12P27-201ENST00000414870 496 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 EIF4A1P13-201ENST00000415667 230 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC003071.2-201ENST00000423857 315 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC007000.2-201ENST00000442564 487 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC007000.1-201ENST00000453064 794 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RN7SL706P-201ENST00000460079 292 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC234782.3-201ENST00000461229 433 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RN7SL414P-201ENST00000469545 294 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RN7SL815P-201ENST00000470970 290 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC109927.2-201ENST00000506416 303 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC009094.1-201ENST00000564443 426 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC244090.2-201ENST00000567614 792 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC121247.2-201ENST00000604776 136 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL161729.2-201ENST00000605700 456 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AC007786.3-201ENST00000615154 596 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 AL512427.1-201ENST00000618593 349 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 LINC00216-201ENST00000623548 1126 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 OR8B1P-202ENST00000641132 1178 ntBASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 RERE-203ENST00000400907 2973 ntTSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC6.48□□□□□ -1.37
SSBP3Q9BWW4 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SSBP3Q9BWW4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms