Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC114755.1-201ENST00000453101 868 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 HSFY5P-201ENST00000453726 309 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC009153.1-201ENST00000485799 496 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AP000619.1-201ENST00000540293 1000 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC233290.1-201ENST00000553021 1186 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AL049874.4-201ENST00000557593 255 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 BOLA2P1-201ENST00000584794 232 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AL683813.2-201ENST00000605245 502 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC018558.4-201ENST00000622153 281 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 DDX10P2-201ENST00000417796 2614 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 TUBBP10-201ENST00000427668 1301 ntBASIC6.65□□□□□ -1.35
SNX18Q96RF0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.65□□□□□ -1.35
SNX18Q96RF0 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 AL357556.1-201ENST00000421884 1388 ntBASIC6.65□□□□□ -1.35
SNX18Q96RF0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.65□□□□□ -1.35
SNX18Q96RF0 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
SNX18Q96RF0 AL355377.1-201ENST00000621125 1653 ntBASIC6.65□□□□□ -1.35
SNX18Q96RF0 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNX18Q96RF0 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AP003471.1-202ENST00000319051 1988 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 NPM1P14-201ENST00000343743 866 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 RN7SKP174-201ENST00000363803 330 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC092952.1-201ENST00000397646 1209 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 SNORA2C-201ENST00000408564 137 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AL390879.2-203ENST00000426943 1121 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC233724.10-201ENST00000510454 409 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 SUMO2P19-201ENST00000518920 295 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 HNRNPRP2-201ENST00000528421 743 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC243312.1-201ENST00000570582 275 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC097376.1-201ENST00000602907 997 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AC104307.1-201ENST00000616142 196 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 AL121985.2-201ENST00000621192 555 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 CCAT2-201ENST00000630920 1752 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms