Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RN7SL126P-201ENST00000616400 299 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC087894.3-201ENST00000623682 349 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC090774.4-201ENST00000578888 1372 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 MAPK10-379ENST00000642013 1385 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AL353898.3-201ENST00000624679 1755 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 U3.14-201ENST00000365363 227 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 SLC25A5P7-201ENST00000406156 896 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 CLCN3P1-201ENST00000423965 1017 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 DUTP4-201ENST00000424782 475 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC026826.1-201ENST00000493002 361 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 RN7SL143P-201ENST00000496780 297 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC097460.2-201ENST00000511857 741 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AL132640.2-202ENST00000559732 614 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC087575.1-201ENST00000585087 229 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC122710.3-201ENST00000606566 541 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AL161931.1-201ENST00000612768 246 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC022960.2-201ENST00000616300 666 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 AC007938.1-201ENST00000562524 2902 ntBASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.91□□□□□ -1.3
ZNF549Q6P9A3 ASNSP6-201ENST00000592770 1618 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC129502.1-201ENST00000623261 1654 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 RN7SKP148-201ENST00000410179 275 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 BX005266.3-201ENST00000443013 1075 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 TUBBP11-201ENST00000472255 252 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 RPL5P15-201ENST00000475870 897 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 RN7SL563P-201ENST00000481233 298 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 OR4C1P-201ENST00000530880 937 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 SNORA70D-201ENST00000578836 135 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC013731.1-201ENST00000604340 883 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC092960.1-201ENST00000604762 351 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AL161420.1-201ENST00000619393 264 ntBASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF549Q6P9A3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms