Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 RN7SL753P-201ENST00000581238 290 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 Six3os1_4.1-201ENST00000615706 324 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AC073862.4-201ENST00000622982 854 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 RN7SKP237-201ENST00000364663 301 ntBASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 PMS2P9-201ENST00000441237 515 ntBASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 AC084754.1-201ENST00000463466 464 ntBASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 GTF2IP6-201ENST00000583143 541 ntBASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 AP001264.1-201ENST00000620602 703 ntBASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CDC42BPAQ5VT25 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 AC092642.1-201ENST00000392417 425 ntBASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 DNAJA1P5-201ENST00000440278 943 ntBASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 DRG1-207ENST00000629688 309 ntTSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 AL353807.3-201ENST00000500626 2505 ntBASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 GLYATL1P1-201ENST00000528297 1607 ntBASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
CDC42BPAQ5VT25 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 GAPDHP16-201ENST00000448152 962 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC004232.1-201ENST00000571388 208 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 RPSAP75-201ENST00000605848 301 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AL080312.2-201ENST00000613001 630 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 MIR6862-1-201ENST00000613016 70 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 MIR6862-2-201ENST00000614755 70 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AL357140.4-201ENST00000636827 412 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC015871.4-201ENST00000624650 2260 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC105046.1-201ENST00000566457 4997 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 RNA5SP433-201ENST00000364491 114 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC133965.1-201ENST00000452984 354 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AC005017.1-201ENST00000482002 490 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 AP003115.1-201ENST00000569849 463 ntBASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms