Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 SCARNA1-201ENST00000517138 166 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 SEC11B-201ENST00000518383 499 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 ATP5J2P4-201ENST00000538774 267 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 AC104072.1-201ENST00000568817 668 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 MIR4685-201ENST00000578185 69 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 MIR4760-201ENST00000585040 80 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCDC27Q2M243 KARSP2-201ENST00000415696 1639 ntBASIC9.48□□□□□ -0.89
CCDC27Q2M243 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCDC27Q2M243 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCDC27Q2M243 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCDC27Q2M243 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCDC27Q2M243 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC9.48□□□□□ -0.89
CCDC27Q2M243 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCDC27Q2M243 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC131649.2-201ENST00000624925 4439 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AL008638.3-201ENST00000623027 5182 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 FLJ42393-201ENST00000623801 2270 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 RNA5SP177-201ENST00000410122 107 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 RN7SKP85-201ENST00000411349 318 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 FABP5P1-201ENST00000423401 411 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AL161626.1-201ENST00000441480 490 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 DBIL5P2-201ENST00000443827 253 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 SUMO2P1-206ENST00000445436 284 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 CKS1BP1-201ENST00000555221 240 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC106785.3-201ENST00000564064 847 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC006116.7-201ENST00000590141 756 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC027271.1-201ENST00000610270 610 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AP001885.1-201ENST00000621658 558 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 ITPK1-AS1-201ENST00000553639 4701 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AF131215.2-201ENST00000531549 1710 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 DPY19L1P1-201ENST00000417811 2594 ntBASIC9.47□□□□□ -0.89
CCDC27Q2M243 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
CCDC27Q2M243 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCDC27Q2M243 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CCDC27Q2M243 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC9.46□□□□□ -0.89
CCDC27Q2M243 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CCDC27Q2M243 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
CCDC27Q2M243 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.46□□□□□ -0.89
CCDC27Q2M243 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CCDC27Q2M243 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCDC27Q2M243 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.46□□□□□ -0.89
CCDC27Q2M243 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
CCDC27Q2M243 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CCDC27Q2M243 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms