Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL021808.1-201ENST00000604325 1117 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 AC097467.4-201ENST00000605504 141 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC5.93□□□□□ -1.46
AP3S2P59780 AC012488.1-201ENST00000611221 640 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 AC099654.4-201ENST00000614168 1059 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 AC010333.3-201ENST00000615100 402 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.93□□□□□ -1.46
AP3S2P59780 TCL6_3.1-201ENST00000619064 137 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
AP3S2P59780 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC5.93□□□□□ -1.46
AP3S2P59780 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
AP3S2P59780 AC010401.2-201ENST00000575137 4934 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.93□□□□□ -1.46
AP3S2P59780 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
AP3S2P59780 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
AP3S2P59780 AKAP17BP-201ENST00000431706 2719 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 AP003486.1-201ENST00000525716 3994 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 AL078595.2-201ENST00000605309 1780 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AP3S2P59780 AC119674.1-213ENST00000641177 1386 ntBASIC5.93□□□□□ -1.46
AP3S2P59780 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 WASF5P-205ENST00000428639 1455 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AC067942.1-201ENST00000488045 1493 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 RPL24P4-201ENST00000326586 421 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 NPM1P38-201ENST00000403835 865 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 MED20-203ENST00000409060 815 ntTSL 2 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC5.92□□□□□ -1.46
AP3S2P59780 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 GAPDHP73-201ENST00000423411 1007 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 MEG8-205ENST00000442197 625 ntTSL 2 BASIC5.92□□□□□ -1.46
AP3S2P59780 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 AP1B1P1-202ENST00000448124 191 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 AL139156.3-201ENST00000454802 394 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 RN7SL414P-201ENST00000469545 294 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 RN7SL272P-201ENST00000487762 289 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 RPS23-208ENST00000512493 443 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC090115.2-201ENST00000548060 883 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 OR4N3P-201ENST00000559395 818 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC093063.1-201ENST00000599317 363 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AL953862.2-201ENST00000603089 820 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 PFN1P2-202ENST00000621347 397 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AC135068.4-201ENST00000622949 925 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC5.92□□□□□ -1.46
AP3S2P59780 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC5.92□□□□□ -1.46
AP3S2P59780 AC093278.2-201ENST00000564956 2485 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
AP3S2P59780 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AP3S2P59780 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.92□□□□□ -1.46
AP3S2P59780 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.92□□□□□ -1.46
AP3S2P59780 TRIM51FP-201ENST00000526452 1353 ntBASIC5.92□□□□□ -1.46
AP3S2P59780 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
AP3S2P59780 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 RN7SKP237-201ENST00000364663 301 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 KRT18P52-201ENST00000404956 846 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.91□□□□□ -1.46
AP3S2P59780 AC007568.1-201ENST00000422912 471 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 RPE-205ENST00000429907 925 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 H3F3BP1-201ENST00000440551 403 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 RN7SL89P-201ENST00000480252 283 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AC096743.1-201ENST00000485172 319 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 RN7SL561P-201ENST00000488553 281 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms