Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 AC233280.20-201ENST00000637412 416 ntBASIC7.47□□□□□ -1.21
NEK3P51956 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 AC069222.1-201ENST00000608028 3360 ntBASIC7.47□□□□□ -1.21
NEK3P51956 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 ICE2P1-201ENST00000512800 1849 ntBASIC7.47□□□□□ -1.21
NEK3P51956 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
NEK3P51956 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NEK3P51956 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NEK3P51956 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
NEK3P51956 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NEK3P51956 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NEK3P51956 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.46□□□□□ -1.21
NEK3P51956 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.46□□□□□ -1.21
NEK3P51956 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 AL589826.1-201ENST00000340697 249 ntBASIC7.46□□□□□ -1.22
NEK3P51956 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 PPIAP22-201ENST00000358455 498 ntBASIC7.46□□□□□ -1.22
NEK3P51956 RNA5SP238-201ENST00000365464 120 ntBASIC7.46□□□□□ -1.22
NEK3P51956 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
NEK3P51956 RN7SKP30-201ENST00000411373 334 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.46□□□□□ -1.22
NEK3P51956 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.46□□□□□ -1.22
NEK3P51956 EEF1GP7-201ENST00000422983 703 ntBASIC7.46□□□□□ -1.22
NEK3P51956 FDPSP6-201ENST00000425091 512 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AL138479.1-201ENST00000426913 484 ntBASIC7.46□□□□□ -1.22
NEK3P51956 Z83313.1-201ENST00000433780 718 ntBASIC7.46□□□□□ -1.22
NEK3P51956 BTBD7P2-201ENST00000441962 620 ntBASIC7.46□□□□□ -1.22
NEK3P51956 FUNDC2P2-202ENST00000443452 493 ntBASIC7.46□□□□□ -1.22
NEK3P51956 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 OR52A4P-202ENST00000481634 799 ntBASIC7.46□□□□□ -1.22
NEK3P51956 RN7SL152P-201ENST00000484176 298 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AC009153.1-201ENST00000485799 496 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.46□□□□□ -1.22
NEK3P51956 AC117525.1-201ENST00000515228 503 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.46□□□□□ -1.22
NEK3P51956 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 SNRPGP1-201ENST00000553864 222 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AC092368.2-201ENST00000565911 600 ntBASIC7.46□□□□□ -1.22
NEK3P51956 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.46□□□□□ -1.22
NEK3P51956 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.46□□□□□ -1.22
NEK3P51956 CCDC58P1-201ENST00000578567 430 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL136139.1-201ENST00000605568 222 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AL136985.2-201ENST00000607372 535 ntBASIC7.46□□□□□ -1.22
NEK3P51956 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.46□□□□□ -1.22
NEK3P51956 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 AC090643.1-201ENST00000623600 3100 ntBASIC7.46□□□□□ -1.22
NEK3P51956 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.46□□□□□ -1.22
NEK3P51956 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
NEK3P51956 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NEK3P51956 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 HDAC1P1-201ENST00000455482 1445 ntBASIC7.45□□□□□ -1.22
NEK3P51956 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 AC068733.2-201ENST00000605434 1418 ntBASIC7.45□□□□□ -1.22
NEK3P51956 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
NEK3P51956 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.45□□□□□ -1.22
NEK3P51956 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NEK3P51956 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms