Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SMARCA4P51532 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 GLYATL1P1-201ENST00000528297 1607 ntBASIC12□□□□□ -0.49
SMARCA4P51532 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 AL354854.1-201ENST00000455940 1363 ntBASIC12□□□□□ -0.49
SMARCA4P51532 SLC9B1P1-201ENST00000331172 1337 ntBASIC12□□□□□ -0.49
SMARCA4P51532 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC12□□□□□ -0.49
SMARCA4P51532 RN7SKP69-201ENST00000365390 305 ntBASIC12□□□□□ -0.49
SMARCA4P51532 SNORA51.9-201ENST00000384295 124 ntBASIC12□□□□□ -0.49
SMARCA4P51532 AL359092.1-201ENST00000417156 265 ntBASIC12□□□□□ -0.49
SMARCA4P51532 PPIAP27-201ENST00000453800 265 ntBASIC12□□□□□ -0.49
SMARCA4P51532 RN7SL174P-201ENST00000475578 289 ntBASIC12□□□□□ -0.49
SMARCA4P51532 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC12□□□□□ -0.49
SMARCA4P51532 AC008507.3-201ENST00000585753 472 ntBASIC12□□□□□ -0.49
SMARCA4P51532 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC12□□□□□ -0.49
SMARCA4P51532 AC109309.2-201ENST00000612597 332 ntBASIC12□□□□□ -0.49
SMARCA4P51532 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC12□□□□□ -0.49
SMARCA4P51532 AC026124.2-201ENST00000621847 656 ntBASIC12□□□□□ -0.49
SMARCA4P51532 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC11.99□□□□□ -0.49
SMARCA4P51532 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC11.99□□□□□ -0.49
SMARCA4P51532 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC11.99□□□□□ -0.49
SMARCA4P51532 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SMARCA4P51532 AL096800.1-201ENST00000405326 893 ntBASIC11.99□□□□□ -0.49
SMARCA4P51532 CYCSP17-201ENST00000407870 315 ntBASIC11.99□□□□□ -0.49
SMARCA4P51532 RN7SKP229-201ENST00000410465 302 ntBASIC11.99□□□□□ -0.49
SMARCA4P51532 RN7SKP296-201ENST00000411185 341 ntBASIC11.99□□□□□ -0.49
SMARCA4P51532 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC11.99□□□□□ -0.49
SMARCA4P51532 TEX41-218ENST00000596540 882 ntTSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 AC073389.3-201ENST00000609434 935 ntBASIC11.99□□□□□ -0.49
SMARCA4P51532 AC004801.6-201ENST00000616571 978 ntBASIC11.99□□□□□ -0.49
SMARCA4P51532 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC11.99□□□□□ -0.49
SMARCA4P51532 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SMARCA4P51532 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC11.99□□□□□ -0.49
SMARCA4P51532 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SMARCA4P51532 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
SMARCA4P51532 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC11.98□□□□□ -0.49
SMARCA4P51532 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SMARCA4P51532 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
SMARCA4P51532 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC11.98□□□□□ -0.49
SMARCA4P51532 MTND2P12-201ENST00000417560 1252 ntBASIC11.98□□□□□ -0.49
SMARCA4P51532 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC11.98□□□□□ -0.49
SMARCA4P51532 RPL12P12-201ENST00000424633 501 ntBASIC11.98□□□□□ -0.49
SMARCA4P51532 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC11.98□□□□□ -0.49
SMARCA4P51532 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC11.98□□□□□ -0.49
SMARCA4P51532 MIR4443-201ENST00000585052 53 ntBASIC11.98□□□□□ -0.49
SMARCA4P51532 U1.41-201ENST00000617626 165 ntBASIC11.98□□□□□ -0.49
SMARCA4P51532 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC11.98□□□□□ -0.49
SMARCA4P51532 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC11.98□□□□□ -0.49
SMARCA4P51532 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SMARCA4P51532 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 AL451046.1-201ENST00000406097 534 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 ERMN-202ENST00000409216 746 ntTSL 4 BASIC11.97□□□□□ -0.49
SMARCA4P51532 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC11.97□□□□□ -0.49
SMARCA4P51532 MTND6P1-201ENST00000417434 424 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC11.97□□□□□ -0.49
SMARCA4P51532 AC112492.2-201ENST00000432774 1030 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 ANKRD54P1-201ENST00000433115 471 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 OR2L9P-201ENST00000444456 913 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 CEACAMP5-201ENST00000448037 961 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 RPS26P39-201ENST00000469206 341 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 GLRXP3-201ENST00000470810 321 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC11.97□□□□□ -0.49
SMARCA4P51532 AC002456.2-201ENST00000509356 380 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 RNA5SP418-201ENST00000515951 117 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SMARCA4P51532 NPIPB14P-203ENST00000532298 987 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms