Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC233724.10-201ENST00000510454 409 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC074029.2-201ENST00000551045 634 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC005632.2-201ENST00000564271 828 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC007136.1-201ENST00000589141 199 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 VN1R87P-201ENST00000596706 487 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC098935.2-201ENST00000604222 466 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC114878.2-201ENST00000604863 1251 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 U47924.1-201ENST00000606539 434 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC016394.1-201ENST00000608444 833 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AP005329.3-201ENST00000609924 686 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC009464.1-201ENST00000615731 469 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 MIR6761-201ENST00000617899 72 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 RN7SL680P-201ENST00000620379 299 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 TSHZ2-205ENST00000626626 670 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL6A2P12110 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 AC027279.1-201ENST00000568885 4284 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 EEF1A1P15-201ENST00000395772 1408 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 MARK2P10-201ENST00000454959 1437 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 RNA5SP378-201ENST00000363646 120 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 MTND4P24-201ENST00000424002 397 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 RPL19P21-201ENST00000424919 591 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 SNX18P3-201ENST00000424993 835 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 MTCO2P23-201ENST00000425216 680 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC007000.2-201ENST00000442564 487 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 RPL4P2-201ENST00000447259 1282 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 KIF3AP1-201ENST00000454055 611 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 VN1R6P-201ENST00000458417 907 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AC020898.1-201ENST00000474167 787 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 RN7SL89P-201ENST00000480252 283 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 RN7SKP265-201ENST00000516448 223 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 SNX18P27-201ENST00000523611 779 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 C1DP5-201ENST00000525775 383 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms