Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RBFOX3A6NFN3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
RBFOX3A6NFN3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.46□□□□□ -1.53
RBFOX3A6NFN3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
RBFOX3A6NFN3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
RBFOX3A6NFN3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RBFOX3A6NFN3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC5.46□□□□□ -1.53
RBFOX3A6NFN3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC093278.2-201ENST00000564956 2485 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RPL24P4-201ENST00000326586 421 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RNA5SP71-201ENST00000362967 126 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RN7SKP237-201ENST00000364663 301 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 UQCRHP1-204ENST00000424609 274 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 HSPE1P27-201ENST00000430808 296 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 CDC42P2-201ENST00000448566 569 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 GAPDHP28-201ENST00000455134 1003 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RN7SL165P-201ENST00000477476 291 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RN7SL335P-201ENST00000482790 304 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RPL34P29-201ENST00000491411 325 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC008496.1-201ENST00000509131 295 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC100823.2-201ENST00000518337 699 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC244131.1-201ENST00000542152 922 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AL953862.2-201ENST00000603089 820 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC009237.12-201ENST00000604755 742 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AL022238.3-201ENST00000609279 443 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC016999.2-201ENST00000614692 556 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AC012100.3-201ENST00000624738 575 ntBASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RBFOX3A6NFN3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 LINC01808-203ENST00000641932 1643 ntBASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RBFOX3A6NFN3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms