Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 MIR654-201ENST00000385199 81 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AL355862.1-201ENST00000412705 353 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AL021939.1-201ENST00000441868 886 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 SDHCP3-201ENST00000445371 506 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 OR51P1P-201ENST00000447547 942 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AP1B1P1-202ENST00000448124 191 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 H3F3AP3-201ENST00000497682 407 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 MTND6P8-201ENST00000503471 522 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 IGLV1-62-201ENST00000518003 441 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC008677.3-201ENST00000519146 666 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 NUTF2P2-201ENST00000551207 384 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC011497.2-201ENST00000600255 639 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 RN7SL3-201ENST00000610674 299 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC006335.3-201ENST00000613408 292 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 MIR6761-201ENST00000617899 72 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC243830.2-201ENST00000618067 630 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 EIF5P2-201ENST00000618904 1035 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 OR1N1-202ENST00000619659 939 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC090373.1-201ENST00000623955 603 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 AC079949.2-201ENST00000617117 2933 ntBASIC5.68□□□□□ -1.5
RCL1Q9Y2P8 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 FAM204BP-201ENST00000369171 701 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 SEPT7P2-202ENST00000398921 823 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 RBMY2YP-201ENST00000423333 912 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 RANP5-201ENST00000427731 655 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 CLUHP5-201ENST00000438421 774 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC109454.1-201ENST00000471205 498 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 GAPDHP31-201ENST00000509325 1014 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC011352.2-201ENST00000514574 1016 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 SCARNA20.3-201ENST00000516913 131 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AL135978.1-201ENST00000553618 1266 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AL109918.2-201ENST00000605188 279 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 OR52B5P-204ENST00000641744 3467 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AC009120.2-204ENST00000621548 2032 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AP000547.3-204ENST00000588548 2523 ntBASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RCL1Q9Y2P8 AP002370.1-201ENST00000528055 1602 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AL662795.2-201ENST00000624252 3706 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms