Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 RN7SKP268-201ENST00000411107 316 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 RNA5SP280-201ENST00000411230 115 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 VN1R6P-201ENST00000458417 907 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 RN7SL849P-201ENST00000485236 295 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 PGAM4P2-201ENST00000512491 721 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 SCARNA11.1-201ENST00000516918 132 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 PRR13P5-201ENST00000596581 442 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AL355333.1-201ENST00000605632 279 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AL589993.1-201ENST00000407450 2524 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 AC061975.5-201ENST00000584928 1441 ntBASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.36□□□□□ -1.07
CLIP2Q9UDT6 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AC127024.8-201ENST00000623719 2094 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ZNF812P-201ENST00000457674 1694 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 YWHAZP5-201ENST00000419975 730 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AL390728.3-201ENST00000452704 270 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 PSPC1P2-201ENST00000455130 225 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 SNORA81.1-201ENST00000458922 177 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 OR5M6P-201ENST00000530227 937 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AL132796.3-201ENST00000624703 900 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AC099654.15-201ENST00000639802 509 ntBASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CLIP2Q9UDT6 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 AL358913.2-201ENST00000553881 1548 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 AL117339.4-201ENST00000608335 7063 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms