Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
CCNB1IP1Q9NPC3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AL606490.2-201ENST00000457562 1330 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AL391380.1-201ENST00000439300 1432 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 MAPK10-270ENST00000641102 3538 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 SNORA73B-201ENST00000363217 204 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC006511.2-201ENST00000388966 660 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AL353626.3-201ENST00000413399 657 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AL713922.1-201ENST00000416477 747 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC016489.1-201ENST00000461109 375 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL58P-201ENST00000473445 294 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC015820.1-201ENST00000473882 321 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL88P-201ENST00000480166 299 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC008799.2-201ENST00000484429 647 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC106774.2-201ENST00000510266 406 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 HIGD1AP9-201ENST00000550710 279 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 BMS1P8-201ENST00000565049 1178 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 MIR4262-201ENST00000578394 54 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AL445647.2-201ENST00000615170 130 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 AL355480.4-201ENST00000626823 69 ntBASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CCNB1IP1Q9NPC3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AL121949.2-201ENST00000403446 1548 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 DDX43P1-201ENST00000510713 1763 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SKP271-201ENST00000410528 320 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 RPL6P2-201ENST00000425480 783 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 RPL7P14-201ENST00000449851 741 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL815P-201ENST00000470970 290 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 OR51A1P-201ENST00000511110 946 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 EIF3KP1-201ENST00000513279 656 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC044860.3-201ENST00000559957 368 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms