Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 RPL9P15-201ENST00000491096 532 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AC091849.1-201ENST00000509920 121 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 MRPS5P3-201ENST00000515577 166 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AC113191.1-201ENST00000517759 403 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AL445383.1-201ENST00000554689 874 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 ERG-205ENST00000398910 4954 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 MKI67P1-201ENST00000604297 1460 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 PSMC1P6-201ENST00000477233 1319 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 RPL7AP69-201ENST00000595306 806 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC036176.3-201ENST00000602456 418 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC091133.5-201ENST00000603088 301 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AL590004.4-201ENST00000566733 7060 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC092349.1-201ENST00000504903 310 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 OR4A13P-201ENST00000529316 942 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 HNRNPA1P74-201ENST00000560782 835 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC005479.3-201ENST00000602790 431 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 AC127071.2-201ENST00000623293 527 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS8Q8N3P4 CLUHP10-201ENST00000631979 980 ntBASIC10.67□□□□□ -0.7
VPS8Q8N3P4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS8Q8N3P4 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms