Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC135721.2-201ENST00000464237 300 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 RPS14P8-201ENST00000478778 369 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC131233.1-201ENST00000479200 955 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 RN7SL868P-201ENST00000485915 303 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 PABPC1P1-201ENST00000506347 591 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC114940.1-201ENST00000512162 1265 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 RNU2-45P-201ENST00000516068 187 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC007537.1-201ENST00000539347 327 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AP005212.3-201ENST00000619964 528 ntBASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
C9orf40Q8IXQ3 AC129502.1-201ENST00000623261 1654 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AC020978.6-201ENST00000571197 3177 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AC034111.1-201ENST00000562143 3770 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 SETP22-201ENST00000412243 957 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PUDPP2-201ENST00000431423 643 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AC245047.1-201ENST00000433276 873 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PHB2P1-201ENST00000434943 890 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 MYL6P3-201ENST00000436904 432 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AL354714.5-201ENST00000450131 590 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 EIF3LP2-201ENST00000457262 807 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PPP1R2P6-201ENST00000478565 588 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 OR4A21P-201ENST00000532759 944 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AL132640.1-201ENST00000559594 619 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AC026458.1-201ENST00000564330 438 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 OR7E19P-202ENST00000589942 844 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 RPS27AP19-201ENST00000597285 458 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 CASC19-212ENST00000641153 1287 ntBASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
C9orf40Q8IXQ3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms