Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 OR5M2P-202ENST00000641241 4242 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 SNORA73B-201ENST00000363217 204 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 SETP22-201ENST00000412243 957 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 MTND2P16-201ENST00000419987 799 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 GRPEL2P2-201ENST00000421856 670 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 SETP8-201ENST00000435341 628 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 MTCO2P6-201ENST00000463134 685 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 RN7SL145P-201ENST00000469955 296 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 RN7SL516P-201ENST00000496127 297 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC233724.10-201ENST00000510454 409 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC119751.5-201ENST00000514077 770 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 RNU6-334P-201ENST00000517072 102 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 MORF4L1P3-201ENST00000525966 950 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 OR7E96P-201ENST00000530816 976 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 MTCYBP27-201ENST00000555160 670 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC040162.2-201ENST00000573092 157 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 ELOCP35-201ENST00000604289 336 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC004852.1-201ENST00000605206 154 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC006335.3-201ENST00000613408 292 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC095038.2-201ENST00000621464 1070 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC097460.3-201ENST00000623099 442 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC129908.1-201ENST00000624553 648 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 FGL2-202ENST00000637771 989 ntBASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AL357556.1-201ENST00000421884 1388 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC022306.1-201ENST00000560489 1562 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RNU6-609P-201ENST00000365459 107 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC113608.1-201ENST00000398740 305 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RPL6P2-201ENST00000425480 783 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 GTF2F2P2-201ENST00000445825 721 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RPL12P40-201ENST00000467028 488 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC005550.2-201ENST00000476382 318 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RN7SKP265-201ENST00000516448 223 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms