Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.23□□□□□ -1.09
CNTNAP3Q9BZ76 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CNTNAP3Q9BZ76 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC8.23□□□□□ -1.09
CNTNAP3Q9BZ76 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL158071.4-201ENST00000608358 4125 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 ZNF833P-201ENST00000424938 1494 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RNU6-907P-201ENST00000390924 102 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RPS20P15-201ENST00000412792 311 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 VN1R35P-201ENST00000428102 693 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC004006.1-201ENST00000434994 377 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RNF148-202ENST00000447240 839 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 NIPA2P5-201ENST00000452282 464 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 TREML3P-201ENST00000457327 501 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RPSAP24-201ENST00000461543 873 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL157777.1-201ENST00000468100 304 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LINC00888-204ENST00000487386 421 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 MTND3P22-201ENST00000510932 243 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 PTGES3P3-201ENST00000511479 482 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC090695.1-201ENST00000561269 1222 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AP005119.2-201ENST00000579735 1105 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 EIF4A2P1-201ENST00000587313 1063 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 LLPHP1-201ENST00000603571 367 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL133520.1-201ENST00000610430 700 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC135507.2-201ENST00000612443 309 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 UBE2Q2P2-203ENST00000613592 761 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AL121594.6-201ENST00000633440 261 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 IPO5P1-201ENST00000593576 2887 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC114980.1-201ENST00000505668 3157 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 AC016526.3-201ENST00000624275 3931 ntBASIC8.22□□□□□ -1.09
CNTNAP3Q9BZ76 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 AC084876.2-201ENST00000624844 1709 ntBASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms