Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC040904.1-201ENST00000590850 223 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC068620.3-201ENST00000602749 560 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC005518.2-201ENST00000603254 282 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC098935.2-201ENST00000604222 466 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC018926.1-201ENST00000616335 435 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 Z99129.2-201ENST00000619967 314 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AL078595.3-201ENST00000623815 1166 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AP000842.4-201ENST00000638781 748 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 DDX50P1-201ENST00000438163 2400 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AC051619.3-201ENST00000560646 2426 ntBASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM48Q8IWZ4 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 PSMC1P4-201ENST00000515236 1327 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 GAS8-AS1-201ENST00000408886 435 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 RPL12P10-201ENST00000413498 498 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC009506.2-201ENST00000420635 840 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 RRM2P4-201ENST00000441721 562 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC009237.1-201ENST00000442127 744 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC092421.1-201ENST00000448148 418 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 MTND2P8-201ENST00000450555 1025 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 SCARNA20.1-201ENST00000516009 138 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 RNA5SP287-201ENST00000516358 103 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 SOX5P1-201ENST00000524155 1127 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC016629.2-201ENST00000597341 199 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 BNIP3P32-201ENST00000600015 554 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC027334.1-201ENST00000603257 310 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC008385.1-201ENST00000604421 355 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC022079.1-201ENST00000621546 602 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC007204.1-201ENST00000621794 555 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC019226.2-201ENST00000625973 424 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AC110792.3-201ENST00000595906 1614 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 AL096816.1-201ENST00000623300 2920 ntBASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM48Q8IWZ4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM48Q8IWZ4 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms