Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 ULK4P1-202ENST00000565174 503 ntBASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 RPS7P1-201ENST00000571702 585 ntBASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 MIR4470-201ENST00000583453 72 ntBASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.4□□□□□ -1.38
NHLRC1Q6VVB1 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 AC110716.2-201ENST00000563865 3945 ntBASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 OR2AH1P-202ENST00000641232 2744 ntBASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 AC100810.3-201ENST00000633189 2240 ntBASIC6.4□□□□□ -1.39
NHLRC1Q6VVB1 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC007938.1-201ENST00000562524 2902 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RNU4-81P-201ENST00000363561 144 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RNU6-1055P-201ENST00000391085 107 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RBBP4P4-201ENST00000398588 1289 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SUMO2P13-201ENST00000403109 272 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 MIR1204-201ENST00000408388 67 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RNA5SP177-201ENST00000410122 107 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RN7SKP232-201ENST00000410170 290 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RPL17P17-201ENST00000419491 557 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 CLIC4P3-201ENST00000422221 752 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 HMGN1P6-201ENST00000438508 291 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AGKP1-201ENST00000455254 1263 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RPSAP7-201ENST00000456871 885 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SNORA81.1-201ENST00000458922 177 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RN7SL325P-201ENST00000460434 283 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RN7SL145P-201ENST00000469955 296 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RN7SL797P-201ENST00000486314 297 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 RPS10P20-201ENST00000494130 463 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC008417.1-201ENST00000510014 565 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 ATP5J2P4-201ENST00000538774 267 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC233290.1-201ENST00000553021 1186 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 MIR3135A-201ENST00000578460 77 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC013731.1-201ENST00000604340 883 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AP005329.3-201ENST00000609924 686 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 MIR6829-201ENST00000620375 67 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC016542.3-201ENST00000623520 619 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC211433.3-201ENST00000623770 375 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms