Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.5□□□□□ -1.21
NEK3P51956 AC023389.2-201ENST00000580031 955 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 AC006116.6-201ENST00000593258 1103 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 AL589765.5-201ENST00000596133 515 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC024451.4-201ENST00000602578 752 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 AL139123.1-201ENST00000612008 430 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.5□□□□□ -1.21
NEK3P51956 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.5□□□□□ -1.21
NEK3P51956 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.5□□□□□ -1.21
NEK3P51956 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.5□□□□□ -1.21
NEK3P51956 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 AL133320.1-201ENST00000621423 2352 ntBASIC7.49□□□□□ -1.21
NEK3P51956 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.49□□□□□ -1.21
NEK3P51956 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NEK3P51956 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
NEK3P51956 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NEK3P51956 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 RPL24P7-201ENST00000399435 453 ntBASIC7.49□□□□□ -1.21
NEK3P51956 AL589994.1-201ENST00000404962 340 ntBASIC7.49□□□□□ -1.21
NEK3P51956 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.49□□□□□ -1.21
NEK3P51956 AL355862.1-201ENST00000412705 353 ntBASIC7.49□□□□□ -1.21
NEK3P51956 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.49□□□□□ -1.21
NEK3P51956 SS18L2P1-201ENST00000445923 213 ntBASIC7.49□□□□□ -1.21
NEK3P51956 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.49□□□□□ -1.21
NEK3P51956 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.49□□□□□ -1.21
NEK3P51956 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.49□□□□□ -1.21
NEK3P51956 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 RNA5SP75-201ENST00000516841 111 ntBASIC7.49□□□□□ -1.21
NEK3P51956 NPM1P52-201ENST00000518264 846 ntBASIC7.49□□□□□ -1.21
NEK3P51956 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.49□□□□□ -1.21
NEK3P51956 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.49□□□□□ -1.21
NEK3P51956 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.49□□□□□ -1.21
NEK3P51956 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.49□□□□□ -1.21
NEK3P51956 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.49□□□□□ -1.21
NEK3P51956 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 RN7SL778P-201ENST00000607160 297 ntBASIC7.49□□□□□ -1.21
NEK3P51956 AC080112.3-201ENST00000612552 880 ntBASIC7.49□□□□□ -1.21
NEK3P51956 FKBP1AP4-201ENST00000631775 336 ntBASIC7.49□□□□□ -1.21
NEK3P51956 AC073488.7-201ENST00000633785 778 ntBASIC7.49□□□□□ -1.21
NEK3P51956 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 AC092821.3-202ENST00000641304 2767 ntBASIC7.49□□□□□ -1.21
NEK3P51956 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.49□□□□□ -1.21
NEK3P51956 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.49□□□□□ -1.21
NEK3P51956 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.49□□□□□ -1.21
NEK3P51956 SAMMSON-203ENST00000641005 2168 ntBASIC7.49□□□□□ -1.21
NEK3P51956 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.49□□□□□ -1.21
NEK3P51956 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NEK3P51956 DDX10P2-201ENST00000417796 2614 ntBASIC7.48□□□□□ -1.21
NEK3P51956 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 ZNF812P-201ENST00000457674 1694 ntBASIC7.48□□□□□ -1.21
NEK3P51956 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NEK3P51956 AL136116.2-201ENST00000404020 785 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AL139039.2-201ENST00000407436 479 ntBASIC7.48□□□□□ -1.21
NEK3P51956 RN7SKP117-201ENST00000410175 264 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms