Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 RNU4-40P-201ENST00000364351 143 ntBASIC6.67□□□□□ -1.34
CD40P25942 MIR301B-201ENST00000390813 78 ntBASIC6.67□□□□□ -1.34
CD40P25942 AC007068.1-201ENST00000396690 844 ntBASIC6.67□□□□□ -1.34
CD40P25942 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 AC009237.9-201ENST00000414800 347 ntBASIC6.67□□□□□ -1.34
CD40P25942 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.67□□□□□ -1.34
CD40P25942 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.67□□□□□ -1.34
CD40P25942 AL590682.1-201ENST00000437248 344 ntBASIC6.67□□□□□ -1.34
CD40P25942 AC140479.1-201ENST00000440423 337 ntBASIC6.67□□□□□ -1.34
CD40P25942 AL137074.1-201ENST00000442640 465 ntBASIC6.67□□□□□ -1.34
CD40P25942 ARMC8P1-201ENST00000443069 1289 ntBASIC6.67□□□□□ -1.34
CD40P25942 TCEAL4P1-201ENST00000453620 588 ntBASIC6.67□□□□□ -1.34
CD40P25942 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 AC016489.1-201ENST00000461109 375 ntBASIC6.67□□□□□ -1.34
CD40P25942 RN7SL308P-201ENST00000464971 297 ntBASIC6.67□□□□□ -1.34
CD40P25942 RN7SL228P-201ENST00000470060 303 ntBASIC6.67□□□□□ -1.34
CD40P25942 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 TPT1P3-201ENST00000492841 512 ntBASIC6.67□□□□□ -1.34
CD40P25942 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.67□□□□□ -1.34
CD40P25942 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 RNU2-45P-201ENST00000516068 187 ntBASIC6.67□□□□□ -1.34
CD40P25942 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.67□□□□□ -1.34
CD40P25942 HAUS1P3-201ENST00000523909 662 ntBASIC6.67□□□□□ -1.34
CD40P25942 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.67□□□□□ -1.34
CD40P25942 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 CBX3P2-202ENST00000583365 535 ntBASIC6.67□□□□□ -1.34
CD40P25942 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 AC022079.1-201ENST00000621546 602 ntBASIC6.67□□□□□ -1.34
CD40P25942 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 AC018558.4-201ENST00000622153 281 ntBASIC6.67□□□□□ -1.34
CD40P25942 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 AC083865.1-201ENST00000636634 831 ntBASIC6.67□□□□□ -1.34
CD40P25942 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.67□□□□□ -1.34
CD40P25942 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.67□□□□□ -1.34
CD40P25942 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 SAMM50P1-201ENST00000455403 1399 ntBASIC6.67□□□□□ -1.34
CD40P25942 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CD40P25942 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 RNU6-252P-201ENST00000363232 107 ntBASIC6.66□□□□□ -1.34
CD40P25942 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 AL158825.1-201ENST00000414735 521 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 MTCYBP31-201ENST00000438855 1122 ntBASIC6.66□□□□□ -1.34
CD40P25942 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.66□□□□□ -1.34
CD40P25942 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.66□□□□□ -1.34
CD40P25942 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.66□□□□□ -1.34
CD40P25942 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.66□□□□□ -1.34
CD40P25942 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 AC004692.1-201ENST00000455430 424 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 CTSLP6-201ENST00000458273 1002 ntBASIC6.66□□□□□ -1.34
CD40P25942 SYT14P1-201ENST00000481459 721 ntBASIC6.66□□□□□ -1.34
CD40P25942 RPL21P47-201ENST00000483696 477 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.66□□□□□ -1.34
CD40P25942 AC079768.1-201ENST00000503181 711 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms