Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC097263.1-201ENST00000496795 606 ntBASIC6.56□□□□□ -1.36
NCK1P16333 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NCK1P16333 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.56□□□□□ -1.36
NCK1P16333 RN7SKP64-201ENST00000517206 328 ntBASIC6.56□□□□□ -1.36
NCK1P16333 AL135978.1-201ENST00000553618 1266 ntBASIC6.56□□□□□ -1.36
NCK1P16333 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
NCK1P16333 NDUFA3P4-201ENST00000560814 250 ntBASIC6.56□□□□□ -1.36
NCK1P16333 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.56□□□□□ -1.36
NCK1P16333 RN7SL42P-201ENST00000579786 294 ntBASIC6.56□□□□□ -1.36
NCK1P16333 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.56□□□□□ -1.36
NCK1P16333 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 RN7SL760P-201ENST00000607344 270 ntBASIC6.56□□□□□ -1.36
NCK1P16333 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 AC106795.5-201ENST00000623288 454 ntBASIC6.56□□□□□ -1.36
NCK1P16333 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NCK1P16333 ZNF969P-201ENST00000510345 2341 ntBASIC6.56□□□□□ -1.36
NCK1P16333 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 AC093278.2-201ENST00000564956 2485 ntBASIC6.56□□□□□ -1.36
NCK1P16333 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NCK1P16333 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NCK1P16333 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NCK1P16333 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NCK1P16333 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 AL606490.2-201ENST00000457562 1330 ntBASIC6.55□□□□□ -1.36
NCK1P16333 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.55□□□□□ -1.36
NCK1P16333 DDX10P2-201ENST00000417796 2614 ntBASIC6.55□□□□□ -1.36
NCK1P16333 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 AL391261.1-201ENST00000555712 1479 ntBASIC6.55□□□□□ -1.36
NCK1P16333 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
NCK1P16333 RNU1-38P-201ENST00000362817 144 ntBASIC6.55□□□□□ -1.36
NCK1P16333 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.55□□□□□ -1.36
NCK1P16333 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.55□□□□□ -1.36
NCK1P16333 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC6.55□□□□□ -1.36
NCK1P16333 TAS2R2P-201ENST00000421146 910 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.55□□□□□ -1.36
NCK1P16333 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.55□□□□□ -1.36
NCK1P16333 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NCK1P16333 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.55□□□□□ -1.36
NCK1P16333 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.55□□□□□ -1.36
NCK1P16333 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.55□□□□□ -1.36
NCK1P16333 AP004607.6-201ENST00000525033 1202 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.55□□□□□ -1.36
NCK1P16333 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 ACTG1P15-201ENST00000570019 1063 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.55□□□□□ -1.36
NCK1P16333 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.55□□□□□ -1.36
NCK1P16333 AP001554.1-201ENST00000604533 376 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.55□□□□□ -1.36
NCK1P16333 AC026951.2-201ENST00000613847 241 ntBASIC6.55□□□□□ -1.36
NCK1P16333 MIR6834-201ENST00000622807 81 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AC120057.5-201ENST00000623840 154 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AC079456.1-201ENST00000624010 480 ntBASIC6.55□□□□□ -1.36
NCK1P16333 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.55□□□□□ -1.36
NCK1P16333 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NCK1P16333 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
NCK1P16333 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
NCK1P16333 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCK1P16333 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
NCK1P16333 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 AC087392.3-202ENST00000358446 1754 ntBASIC6.54□□□□□ -1.36
NCK1P16333 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 AC022034.1-201ENST00000512867 2156 ntBASIC6.54□□□□□ -1.36
NCK1P16333 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
NCK1P16333 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.54□□□□□ -1.36
NCK1P16333 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 AL139384.2-201ENST00000613809 3590 ntBASIC6.54□□□□□ -1.36
NCK1P16333 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.54□□□□□ -1.36
NCK1P16333 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NCK1P16333 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NCK1P16333 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCK1P16333 HMGB1P39-201ENST00000366304 880 ntBASIC6.54□□□□□ -1.36
NCK1P16333 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.54□□□□□ -1.36
NCK1P16333 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC6.54□□□□□ -1.36
NCK1P16333 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.54□□□□□ -1.36
NCK1P16333 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.54□□□□□ -1.36
NCK1P16333 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.54□□□□□ -1.36
NCK1P16333 OR5P4P-201ENST00000424698 917 ntBASIC6.54□□□□□ -1.36
NCK1P16333 AC130472.1-201ENST00000427885 309 ntBASIC6.54□□□□□ -1.36
NCK1P16333 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms