Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
FREM3P0C091 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 ENO1P4-201ENST00000416471 1785 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.35□□□□□ -1.39
FREM3P0C091 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 RN7SKP91-201ENST00000410852 288 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 RN7SL797P-201ENST00000486314 297 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.35□□□□□ -1.39
FREM3P0C091 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
FREM3P0C091 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 AC090771.1-201ENST00000585803 1618 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AL358913.2-201ENST00000553881 1548 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 FANCD2P2-201ENST00000437591 1400 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AC011379.1-201ENST00000508713 3025 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 RN7SKP23-201ENST00000625159 4301 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.34□□□□□ -1.39
FREM3P0C091 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.34□□□□□ -1.39
FREM3P0C091 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
FREM3P0C091 LDHAP5-201ENST00000394996 622 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 AL451061.1-201ENST00000407887 862 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.34□□□□□ -1.39
FREM3P0C091 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.34□□□□□ -1.39
FREM3P0C091 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 AC114755.4-201ENST00000439114 443 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 AL845321.1-201ENST00000444603 348 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.34□□□□□ -1.39
FREM3P0C091 OR13C1P-201ENST00000457612 963 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.34□□□□□ -1.39
FREM3P0C091 RN7SL143P-201ENST00000496780 297 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 RNA5SP318-201ENST00000516352 92 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 AC100854.1-201ENST00000520351 341 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 IGLVV-66-201ENST00000523818 341 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.34□□□□□ -1.39
FREM3P0C091 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.34□□□□□ -1.39
FREM3P0C091 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 COX6CP16-201ENST00000603667 216 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 AC015819.1-201ENST00000613588 663 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 AC004943.1-203ENST00000624370 1074 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.34□□□□□ -1.39
FREM3P0C091 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
FREM3P0C091 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.34□□□□□ -1.39
FREM3P0C091 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.34□□□□□ -1.39
FREM3P0C091 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.34□□□□□ -1.39
FREM3P0C091 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
FREM3P0C091 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FREM3P0C091 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
FREM3P0C091 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FREM3P0C091 OR10D1P-201ENST00000355343 936 ntBASIC6.34□□□□□ -1.4
FREM3P0C091 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FREM3P0C091 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.34□□□□□ -1.4
FREM3P0C091 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.34□□□□□ -1.4
FREM3P0C091 AHCYP8-201ENST00000425108 209 ntBASIC6.34□□□□□ -1.4
FREM3P0C091 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
FREM3P0C091 MYL6P3-201ENST00000436904 432 ntBASIC6.34□□□□□ -1.4
FREM3P0C091 RPL7AP71-201ENST00000451120 739 ntBASIC6.34□□□□□ -1.4
FREM3P0C091 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.34□□□□□ -1.4
FREM3P0C091 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.34□□□□□ -1.4
FREM3P0C091 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.34□□□□□ -1.4
FREM3P0C091 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.34□□□□□ -1.4
FREM3P0C091 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
FREM3P0C091 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.34□□□□□ -1.4
FREM3P0C091 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.34□□□□□ -1.4
FREM3P0C091 TMEM14EP-202ENST00000639378 1296 ntBASIC6.34□□□□□ -1.4
FREM3P0C091 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.34□□□□□ -1.4
FREM3P0C091 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FREM3P0C091 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FREM3P0C091 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
FREM3P0C091 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 TTC3P1-201ENST00000399586 6081 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms