Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL1P09341 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL1P09341 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL1P09341 AC140134.1-201ENST00000511830 3544 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 AC105749.1-201ENST00000631338 2008 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 WDR95P-201ENST00000425638 1542 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 SF3A3P1-201ENST00000446317 1477 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 EEF1A1P4-201ENST00000359165 1405 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 AL078621.1-201ENST00000272567 768 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 MIR654-201ENST00000385199 81 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 RPSAP60-201ENST00000415403 880 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 AC074121.1-201ENST00000441836 348 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AL355355.1-201ENST00000442900 793 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC117382.1-201ENST00000468074 730 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 RN7SL798P-201ENST00000468562 301 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 AP005202.1-201ENST00000489915 867 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 AL031073.1-201ENST00000503029 1139 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 OR6M3P-201ENST00000531567 700 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC129492.5-201ENST00000603489 315 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL1P09341 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL1P09341 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL1P09341 AC006116.1-201ENST00000587908 2171 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 AC018765.1-201ENST00000623357 3446 ntBASIC5.35□□□□□ -1.55
CXCL1P09341 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL1P09341 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 MARK2P10-201ENST00000454959 1437 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 TRIM51FP-201ENST00000526452 1353 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CXCL1P09341 RNU4-59P-201ENST00000364447 116 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CXCL1P09341 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 RN7SKP225-201ENST00000410405 352 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 RN7SKP188-201ENST00000410789 317 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 RNA5SP115-201ENST00000411160 107 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 CYP4F62P-201ENST00000417310 524 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms