Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC187A0A096LP49 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC187A0A096LP49 AC145138.1-201ENST00000512908 2851 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 OR5T3-201ENST00000303059 1023 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 SNORA70G-201ENST00000383923 142 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 RPL24P2-201ENST00000421023 475 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 SEC63P1-201ENST00000425785 1258 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 RPL5P4-201ENST00000434805 886 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AL136981.1-203ENST00000451452 3844 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AP004607.6-201ENST00000525033 1202 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC069240.2-201ENST00000550242 609 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 OR4N3P-201ENST00000559395 818 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 EEF1B2P1-201ENST00000567221 672 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 MIR4312-201ENST00000579909 76 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC023389.2-201ENST00000580031 955 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 SETP3-201ENST00000581726 813 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 RN7SL667P-201ENST00000582817 298 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC245128.3-201ENST00000594721 748 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 BNIP3P7-201ENST00000605641 516 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 MIR6885-201ENST00000612241 66 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC135068.4-201ENST00000622949 925 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC007603.3-201ENST00000636915 979 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 AC126773.4-201ENST00000612545 3043 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 CR383656.5-201ENST00000547616 1340 ntBASIC6.9□□□□□ -1.3
CCDC187A0A096LP49 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 AC007012.2-201ENST00000623206 1676 ntBASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 AC004023.1-201ENST00000561473 1744 ntBASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC187A0A096LP49 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AL449283.1-201ENST00000602631 3403 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 MIR152-201ENST00000385212 87 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AL139806.1-201ENST00000403057 1002 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AL033519.1-201ENST00000407266 307 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 RN7SKP85-201ENST00000411349 318 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AP003385.1-201ENST00000426387 893 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 RPL12P49-201ENST00000441100 121 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC187A0A096LP49 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms