Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 SNORA70.8-201ENST00000384231 136 ntBASIC9.54□□□□□ -0.88
CCDC27Q2M243 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC108157.1-201ENST00000510511 539 ntBASIC9.54□□□□□ -0.88
CCDC27Q2M243 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC018523.1-201ENST00000534211 512 ntBASIC9.54□□□□□ -0.88
CCDC27Q2M243 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AL049869.4-201ENST00000555669 178 ntBASIC9.54□□□□□ -0.88
CCDC27Q2M243 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC015801.1-201ENST00000585651 153 ntBASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 MKKS-203ENST00000609375 882 ntTSL 2 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AL157713.1-201ENST00000379752 1531 ntBASIC9.54□□□□□ -0.88
CCDC27Q2M243 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CCDC27Q2M243 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC9.54□□□□□ -0.88
CCDC27Q2M243 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 RNU2-5P-201ENST00000410533 180 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 NIP7P1-201ENST00000433227 512 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 ST13P2-201ENST00000438916 1109 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 VN1R6P-201ENST00000458417 907 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 ENPP7P3-201ENST00000509123 241 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC005000.1-201ENST00000536192 288 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC093510.2-201ENST00000562820 896 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 RPS7P1-201ENST00000571702 585 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC006120.1-201ENST00000579375 546 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC127071.2-201ENST00000623293 527 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 DDX6P1-205ENST00000441966 1436 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 USP3-201ENST00000268049 5311 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 PSMC1P4-201ENST00000515236 1327 ntBASIC9.53□□□□□ -0.88
CCDC27Q2M243 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC9.53□□□□□ -0.88
CCDC27Q2M243 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CCDC27Q2M243 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CCDC27Q2M243 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CCDC27Q2M243 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CCDC27Q2M243 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CCDC27Q2M243 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC9.52□□□□□ -0.88
CCDC27Q2M243 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC9.52□□□□□ -0.89
CCDC27Q2M243 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms