Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC011352.2-201ENST00000514574 1016 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 RN7SKP67-201ENST00000515905 235 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 NUTF2P2-201ENST00000551207 384 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AL135978.1-201ENST00000553618 1266 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 RN7SL155P-201ENST00000581538 263 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 MIR6872-201ENST00000612981 62 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC245407.2-201ENST00000614199 451 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 uc_338.21-201ENST00000622458 147 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 SAMMSON-203ENST00000641005 2168 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AC074198.1-201ENST00000506546 1397 ntBASIC6.04□□□□□ -1.44
HLA-DQB1P01920 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB1P01920 TPTE2P2-201ENST00000403471 1466 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC110373.1-201ENST00000505994 3505 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 KYNUP1-201ENST00000466683 1406 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 TRIM60P14-201ENST00000513444 1419 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC020983.1-201ENST00000417063 543 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 HMGN2P24-201ENST00000433516 273 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 BSNDP4-201ENST00000436076 388 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 RN7SL165P-201ENST00000477476 291 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 RN7SL835P-201ENST00000579920 262 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AL137190.1-201ENST00000603288 282 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC005790.1-201ENST00000619774 450 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 AC124944.3-204ENST00000641191 150 ntBASIC6.03□□□□□ -1.44
HLA-DQB1P01920 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-DQB1P01920 TTC41P-205ENST00000551270 3963 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 RNA5SP172-201ENST00000365061 118 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 RNU1-16P-201ENST00000365477 164 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 AC133644.1-201ENST00000398171 937 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 IGLC6-201ENST00000410078 317 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 RPL23AP34-201ENST00000423483 410 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 UQCRHP1-204ENST00000424609 274 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 RPL5P27-201ENST00000437011 881 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.02□□□□□ -1.45
HLA-DQB1P01920 AL451063.1-201ENST00000450164 1133 ntBASIC6.02□□□□□ -1.45
HLA-DQB1P01920 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms