Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 RPS27P18-201ENST00000431701 247 ntBASIC6.53□□□□□ -1.36
CHD8Q9HCK8 MTCYBP21-201ENST00000443300 1113 ntBASIC6.53□□□□□ -1.36
CHD8Q9HCK8 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 AC093267.1-201ENST00000489176 961 ntBASIC6.53□□□□□ -1.36
CHD8Q9HCK8 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 AL512310.9-201ENST00000553311 948 ntBASIC6.53□□□□□ -1.36
CHD8Q9HCK8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.53□□□□□ -1.36
CHD8Q9HCK8 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD8Q9HCK8 AC005921.3-201ENST00000623774 2151 ntBASIC6.52□□□□□ -1.36
CHD8Q9HCK8 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.52□□□□□ -1.36
CHD8Q9HCK8 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC6.52□□□□□ -1.36
CHD8Q9HCK8 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
CHD8Q9HCK8 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC110769.2-201ENST00000602760 1548 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC138207.6-201ENST00000579164 1967 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AL391361.1-201ENST00000405580 489 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AL356967.1-201ENST00000406305 431 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 RN7SKP254-201ENST00000410685 310 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 RARRES2P3-201ENST00000457739 473 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 IGKV2-18-201ENST00000522607 343 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC126175.1-201ENST00000617041 758 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AL162171.3-201ENST00000617439 3178 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 LRRC37A17P-201ENST00000570311 4693 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 RPL11P4-201ENST00000332269 436 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 RN7SKP189-201ENST00000365042 330 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 IGLC4-201ENST00000517690 248 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 SERPINA15P-201ENST00000529287 266 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC079598.4-201ENST00000549647 265 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC135626.1-201ENST00000556983 435 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 MIR7155-201ENST00000615925 56 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AC005609.2-201ENST00000623320 592 ntBASIC6.52□□□□□ -1.37
CHD8Q9HCK8 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHD8Q9HCK8 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC008753.1-201ENST00000423096 284 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms