Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 PPIAP26-201ENST00000377951 522 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 RNA5SP115-201ENST00000411160 107 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 RN7SL362P-201ENST00000494228 267 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 RPL41P2-201ENST00000544920 409 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC125612.1-201ENST00000547580 377 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 AC015982.1-201ENST00000608113 465 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 RN7SL261P-201ENST00000613441 282 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 QRSL1P1-201ENST00000400977 1540 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 ASNSP6-201ENST00000592770 1618 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 KARSP2-201ENST00000415696 1639 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC007679.3-201ENST00000434035 414 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC245047.5-201ENST00000437312 556 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC124891.1-201ENST00000536322 519 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 RN7SL230P-201ENST00000580835 303 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC097641.3-201ENST00000613523 464 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 uc_338.31-201ENST00000615595 186 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 AL035425.4-201ENST00000624509 1063 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.44□□□□□ -1.06
SNED1Q8TER0 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 OR8B9P-202ENST00000642028 5216 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNED1Q8TER0 AC016251.1-201ENST00000624299 4198 ntBASIC8.44□□□□□ -1.06
SNED1Q8TER0 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC008555.1-201ENST00000561778 2757 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 UBBP1-201ENST00000392399 473 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 FABP5P1-201ENST00000423401 411 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 RPSAP65-201ENST00000429660 595 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 GTF2IP14-201ENST00000441415 586 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 RPL23AP28-201ENST00000448062 470 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 H3F3AP5-201ENST00000475267 429 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC090568.1-201ENST00000509499 856 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC084121.1-201ENST00000533882 835 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC013283.1-201ENST00000557282 492 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC026956.1-201ENST00000558741 396 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AL078601.3-201ENST00000573303 535 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AL590032.1-201ENST00000604920 252 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms