Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 U3.48-201ENST00000363172 216 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 RNU6-1017P-201ENST00000363613 106 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 RNA5SP172-201ENST00000365061 118 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 RN7SKP1-201ENST00000365525 307 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 RPL9P21-201ENST00000392269 505 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AF274573.1-201ENST00000430535 494 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 SDHCP3-201ENST00000445371 506 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 RPLP0P1-201ENST00000457002 361 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 OR7E154P-201ENST00000525174 932 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 FXNP1-201ENST00000555153 337 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AC096708.2-201ENST00000577676 512 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 MIR4685-201ENST00000578185 69 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AL136370.1-201ENST00000608166 691 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AP001002.2-201ENST00000625137 386 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 PWRN1-212ENST00000569908 1435 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC022819.1-201ENST00000563495 3910 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC226101.1-201ENST00000401483 387 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 CLIC4P3-201ENST00000422221 752 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 RBMY2JP-201ENST00000425544 1059 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 PSMA6P2-201ENST00000457574 686 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 PRR13P5-201ENST00000596581 442 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AL133445.2-201ENST00000611191 527 ntBASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNF549Q6P9A3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC005839.1-201ENST00000624148 3213 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AL133243.4-201ENST00000623116 3109 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 MIR152-201ENST00000385212 87 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 FTLP17-201ENST00000432567 525 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 LSM3P3-201ENST00000436601 306 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms