Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FREM3P0C091 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.39□□□□□ -1.39
FREM3P0C091 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.39□□□□□ -1.39
FREM3P0C091 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FREM3P0C091 RNA5SP114-201ENST00000363780 113 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 FAM204BP-201ENST00000369171 701 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 RN7SKP268-201ENST00000411107 316 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 AC008753.1-201ENST00000423096 284 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.38□□□□□ -1.39
FREM3P0C091 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 AC114940.1-201ENST00000512162 1265 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.38□□□□□ -1.39
FREM3P0C091 RNA5SP518-201ENST00000515957 119 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 AL139317.4-201ENST00000605879 760 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FREM3P0C091 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 AL022323.4-201ENST00000623980 13120 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 AC009237.3-203ENST00000442128 3551 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FREM3P0C091 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.38□□□□□ -1.39
FREM3P0C091 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FREM3P0C091 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.38□□□□□ -1.39
FREM3P0C091 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.38□□□□□ -1.39
FREM3P0C091 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.38□□□□□ -1.39
FREM3P0C091 AC089984.3-201ENST00000552838 363 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 AL135978.1-201ENST00000553618 1266 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 ULK4P1-202ENST00000565174 503 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.38□□□□□ -1.39
FREM3P0C091 AL121583.1-201ENST00000612444 682 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
FREM3P0C091 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.38□□□□□ -1.39
FREM3P0C091 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
FREM3P0C091 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
FREM3P0C091 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 AP000766.1-201ENST00000561746 4140 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 PDCL3P5-201ENST00000398028 722 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.37□□□□□ -1.39
FREM3P0C091 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 GSTA6P-201ENST00000424144 582 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 UOX-201ENST00000471089 899 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 RPS4XP23-201ENST00000487801 237 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.37□□□□□ -1.39
FREM3P0C091 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.37□□□□□ -1.39
FREM3P0C091 RN7SKP11-201ENST00000517018 287 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 CARSP2-201ENST00000520688 277 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 NDUFA3P2-201ENST00000531434 232 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 OR4A1P-201ENST00000532342 920 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC007537.1-201ENST00000539347 327 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC100832.2-201ENST00000582080 776 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC048341.3-201ENST00000619323 491 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC005899.6-201ENST00000620729 297 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC211433.3-201ENST00000623770 375 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC026108.1-201ENST00000635444 547 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms