Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC068631.3-201ENST00000538831 225 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RPS7P1-201ENST00000571702 585 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AP005329.3-201ENST00000609924 686 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC004839.1-201ENST00000610269 501 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AL121985.2-201ENST00000621192 555 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC087893.2-201ENST00000623272 255 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AL035563.1-201ENST00000609087 1539 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC079178.2-201ENST00000439323 1624 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 MROH3P-201ENST00000435735 2676 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC006116.1-201ENST00000587908 2171 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC008957.3-201ENST00000624112 2242 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 MAPK10-383ENST00000642032 3390 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 SNORA30B-201ENST00000365319 129 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ARMCX7P-201ENST00000372828 562 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC023141.1-201ENST00000419418 379 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 GAPDHP55-201ENST00000423136 803 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 PHB2P1-201ENST00000434943 890 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC104698.1-201ENST00000435671 276 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 FDPSP8-201ENST00000438304 1089 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 TAAR3P-201ENST00000466706 1078 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL791P-201ENST00000467868 295 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL688P-201ENST00000471754 275 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 TAAR3P-202ENST00000481759 1025 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 RPL5P11-201ENST00000498068 893 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 OR7E163P-201ENST00000505943 894 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 PABPC1P1-201ENST00000506347 591 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC120036.3-201ENST00000517826 292 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ST13P6-201ENST00000522430 1102 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AL049869.4-201ENST00000555669 178 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC092368.2-201ENST00000565911 600 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC243312.1-201ENST00000570582 275 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 MIR5705-201ENST00000579870 89 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 FGL2-202ENST00000637771 989 ntBASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 ENSA-215ENST00000638926 360 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DRB4X5D2U9 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 AL136298.2-201ENST00000556497 1570 ntBASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 KARSP2-201ENST00000415696 1639 ntBASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 IARS-205ENST00000443024 4341 ntTSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms