Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 RNA5SP333-201ENST00000363466 118 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 RNA5SP334-201ENST00000364825 118 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 RIT1-201ENST00000368322 855 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 BMS1P12-201ENST00000428213 706 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 RN7SL395P-201ENST00000462960 291 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 RN7SL12P-201ENST00000473849 290 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ALG13-214ENST00000482742 620 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC146944.3-201ENST00000509969 371 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 OR7E87P-201ENST00000532397 929 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 NUTF2P2-201ENST00000551207 384 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC009997.1-201ENST00000557862 129 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 MIR4420-201ENST00000583944 77 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC087645.1-201ENST00000588528 291 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC093063.1-201ENST00000599317 363 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC097376.1-201ENST00000602907 997 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 YTHDF2P1-201ENST00000604759 1271 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AP003789.1-201ENST00000617737 605 ntBASIC5.31□□□□□ -1.56
AP1S3Q96PC3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 TTC38-207ENST00000629918 162 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 CDY7P-201ENST00000429883 1604 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 EEF1A1P26-201ENST00000458319 1363 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 CDY5P-201ENST00000411487 1580 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 CDY9P-201ENST00000451397 1580 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 GZMB-203ENST00000382542 666 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 MIR654-201ENST00000385199 81 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 RNU6-316P-201ENST00000391027 107 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AL590762.1-201ENST00000391782 432 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 RN7SKP232-201ENST00000410170 290 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 OR5W1P-201ENST00000423705 938 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AC012493.1-201ENST00000453252 760 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 TUBB4BP2-201ENST00000454125 798 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 RN7SL272P-201ENST00000487762 289 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AC073648.1-201ENST00000508957 930 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC5.3□□□□□ -1.56
AP1S3Q96PC3 OR7E85P-201ENST00000512164 985 ntBASIC5.3□□□□□ -1.56
AP1S3Q96PC3 SNORA70.23-201ENST00000517218 151 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms