Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL451085.1-201ENST00000604546 690 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC135050.6-202ENST00000613584 392 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 FAM27E3-202ENST00000614611 340 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC241377.1-201ENST00000619797 406 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AL357153.4-201ENST00000620487 1016 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC129908.1-201ENST00000624553 648 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 CASC19-208ENST00000641056 1292 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AL596275.2-208ENST00000641192 594 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 CASC19-227ENST00000641411 1285 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC119674.1-209ENST00000642031 997 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 VEZF1P1-201ENST00000423931 1541 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AL357556.1-201ENST00000421884 1388 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC093829.1-201ENST00000506662 1618 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC087045.3-201ENST00000623046 2468 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC016251.2-201ENST00000623393 3089 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AL606490.2-201ENST00000457562 1330 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 KYNUP1-201ENST00000466683 1406 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 RN7SKP211-201ENST00000363328 315 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC244452.1-201ENST00000413798 141 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC004986.1-201ENST00000414855 607 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 RPL36P18-201ENST00000419316 318 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 RPL12P40-201ENST00000467028 488 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 COX6CP11-201ENST00000555293 229 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 MIR4433B-201ENST00000581329 102 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 OR5AH1P-201ENST00000595968 283 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC004852.1-201ENST00000605206 154 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AL022238.3-201ENST00000609279 443 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC244517.3-201ENST00000616254 1235 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC087893.2-201ENST00000623272 255 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AP003072.5-201ENST00000623872 773 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VMP1Q96GC9 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 AC100810.3-201ENST00000633189 2240 ntBASIC7.03□□□□□ -1.28
VMP1Q96GC9 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.03□□□□□ -1.28
VMP1Q96GC9 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
VMP1Q96GC9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 MIR640-201ENST00000385086 96 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 PTMAP8-201ENST00000397729 342 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 SNORA81-201ENST00000408493 178 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 SNX18P3-201ENST00000424993 835 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 AL591379.2-201ENST00000450223 397 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 AL390728.3-201ENST00000452704 270 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 AC013429.1-201ENST00000456604 422 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 AL390026.1-201ENST00000456647 457 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 RNA5SP116-201ENST00000516132 98 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms