Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC026336.1-201ENST00000466577 351 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC026254.2-201ENST00000475295 371 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RN7SL869P-201ENST00000497032 300 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC134698.1-201ENST00000511619 643 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RN7SKP98-201ENST00000517070 156 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC100823.2-201ENST00000518337 699 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 NATP-201ENST00000523491 878 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 SNX18P27-201ENST00000523611 779 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 OR4R2P-201ENST00000530815 597 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC018523.1-201ENST00000534211 512 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 OR5BK1P-201ENST00000550421 823 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 CR383656.14-201ENST00000551951 406 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL049874.4-201ENST00000557593 255 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC098483.2-201ENST00000603158 454 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 MIR6731-201ENST00000614863 72 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL121985.2-201ENST00000621192 555 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC107980.1-201ENST00000558671 3355 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC132219.2-201ENST00000624416 2327 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC127070.3-201ENST00000503695 3263 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 MARK2P10-201ENST00000454959 1437 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AP003471.1-202ENST00000319051 1988 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 U3.1-201ENST00000362500 215 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AL109918.1-202ENST00000406724 436 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 RN7SL834P-201ENST00000461450 286 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC009153.1-201ENST00000485799 496 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 RPL5P11-201ENST00000498068 893 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC114300.1-201ENST00000502347 280 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 PABPC1P1-201ENST00000506347 591 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 OR10J9P-201ENST00000511932 987 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AP001124.1-201ENST00000529628 385 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 OR7E1P-201ENST00000533891 958 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AL355076.3-201ENST00000555838 587 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AL365223.1-201ENST00000574864 1297 ntBASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.86□□□□□ -1.31
AMBRA1Q9C0C7 AC009955.2-201ENST00000597288 542 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms