Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
SLC1A1P43005 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.41□□□□□ -1.22
SLC1A1P43005 RN7SKP271-201ENST00000410528 320 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 MTND6P1-201ENST00000417434 424 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AL161626.1-201ENST00000441480 490 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC011742.2-201ENST00000443818 352 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 OR51P1P-201ENST00000447547 942 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 BZW1P1-201ENST00000454901 1240 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 EIF3KP1-201ENST00000513279 656 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC087360.1-201ENST00000518788 616 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AP006437.1-202ENST00000530327 933 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.41□□□□□ -1.22
SLC1A1P43005 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC087575.1-201ENST00000585087 229 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.41□□□□□ -1.22
SLC1A1P43005 AC008385.1-201ENST00000604421 355 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AC005785.2-201ENST00000624655 631 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AL049541.2-201ENST00000626377 555 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.41□□□□□ -1.22
SLC1A1P43005 OR5AU1-204ENST00000641822 1197 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 MAPK10-365ENST00000641902 3825 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 OR7E161P-202ENST00000641994 1033 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.41□□□□□ -1.22
SLC1A1P43005 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.41□□□□□ -1.22
SLC1A1P43005 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
SLC1A1P43005 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SLC1A1P43005 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.41□□□□□ -1.22
SLC1A1P43005 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SLC1A1P43005 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SLC1A1P43005 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SLC1A1P43005 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SLC1A1P43005 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SLC1A1P43005 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 CYCSP44-201ENST00000448560 313 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 BX323845.2-201ENST00000458382 234 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 PABPC1P10-201ENST00000464731 381 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 RN7SL308P-201ENST00000464971 297 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.4□□□□□ -1.22
SLC1A1P43005 AC111000.1-201ENST00000514545 713 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.4□□□□□ -1.22
SLC1A1P43005 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
SLC1A1P43005 GTF2IP6-201ENST00000583143 541 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 NDUFA3P1-201ENST00000588007 252 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 AC063962.1-201ENST00000608199 521 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.4□□□□□ -1.22
SLC1A1P43005 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.4□□□□□ -1.22
SLC1A1P43005 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SLC1A1P43005 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 RAD17P2-201ENST00000451754 1977 ntBASIC7.4□□□□□ -1.23
SLC1A1P43005 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.4□□□□□ -1.23
SLC1A1P43005 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.4□□□□□ -1.23
SLC1A1P43005 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.4□□□□□ -1.23
SLC1A1P43005 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SLC1A1P43005 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SLC1A1P43005 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
SLC1A1P43005 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SLC1A1P43005 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.39□□□□□ -1.23
SLC1A1P43005 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SLC1A1P43005 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms