Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 RNA5SP308-201ENST00000362532 115 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 FDPSP5-201ENST00000399474 1057 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 AL359715.1-201ENST00000404330 555 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 THEM7P-201ENST00000419556 672 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 AC128677.1-201ENST00000436016 442 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC8.94□□□□□ -0.98
COL15A1P39059 RN7SKP70-201ENST00000516655 271 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.94□□□□□ -0.98
COL15A1P39059 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 AC026458.1-201ENST00000564330 438 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 AC104184.1-201ENST00000607513 721 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 MIR7109-201ENST00000613748 65 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 AL358913.2-201ENST00000553881 1548 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 AC217777.1-201ENST00000570034 1471 ntBASIC8.94□□□□□ -0.98
COL15A1P39059 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
COL15A1P39059 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.94□□□□□ -0.98
COL15A1P39059 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.94□□□□□ -0.98
COL15A1P39059 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
COL15A1P39059 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 AC009948.5-201ENST00000624360 4406 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 VN1R12P-201ENST00000403778 876 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 RNA5SP155-201ENST00000411154 129 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 AL139184.1-202ENST00000422303 222 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 IGLVV-66-201ENST00000523818 341 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.93□□□□□ -0.98
COL15A1P39059 MIR4310-201ENST00000582950 57 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 AC017037.4-201ENST00000624526 826 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AL132796.3-201ENST00000624703 900 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AC068213.1-201ENST00000625124 226 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 TEX41-271ENST00000628213 993 ntTSL 5 BASIC8.93□□□□□ -0.98
COL15A1P39059 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.93□□□□□ -0.98
COL15A1P39059 CDY19P-201ENST00000411668 1613 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 CDY18P-201ENST00000438294 1609 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 AC063923.1-201ENST00000478982 1619 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
COL15A1P39059 AC092701.1-201ENST00000623627 1551 ntBASIC8.93□□□□□ -0.98
COL15A1P39059 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.93□□□□□ -0.98
COL15A1P39059 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.92□□□□□ -0.98
COL15A1P39059 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms