Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.16□□□□□ -1.1
HOXD10P28358 RN7SL230P-201ENST00000580835 303 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD10P28358 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD10P28358 AC073592.6-201ENST00000624271 415 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HOXD10P28358 RN7SKP23-201ENST00000625159 4301 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.16□□□□□ -1.1
HOXD10P28358 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HOXD10P28358 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 AC006116.1-201ENST00000587908 2171 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HOXD10P28358 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 RNA5SP232-201ENST00000364144 119 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
HOXD10P28358 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.15□□□□□ -1.1
HOXD10P28358 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.15□□□□□ -1.1
HOXD10P28358 RPSAP40-201ENST00000442343 891 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 AC234771.2-201ENST00000445718 597 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 OR7E22P-201ENST00000478335 1035 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 RPL12P7-201ENST00000493832 494 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.15□□□□□ -1.1
HOXD10P28358 MAST4-IT1-201ENST00000514241 658 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD10P28358 AC011853.1-201ENST00000518911 454 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.15□□□□□ -1.1
HOXD10P28358 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.15□□□□□ -1.1
HOXD10P28358 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.15□□□□□ -1.1
HOXD10P28358 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 AC005858.3-201ENST00000624756 589 ntBASIC8.15□□□□□ -1.1
HOXD10P28358 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
HOXD10P28358 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD10P28358 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD10P28358 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD10P28358 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.15□□□□□ -1.11
HOXD10P28358 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD10P28358 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD10P28358 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HOXD10P28358 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
HOXD10P28358 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXD10P28358 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
HOXD10P28358 MYL6P3-201ENST00000436904 432 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 AL096803.1-201ENST00000456921 1021 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.14□□□□□ -1.11
HOXD10P28358 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXD10P28358 AC079866.1-201ENST00000534985 1220 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXD10P28358 RN7SL753P-201ENST00000581238 290 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
HOXD10P28358 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXD10P28358 AC127071.2-201ENST00000623293 527 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXD10P28358 AC036108.4-201ENST00000611654 2516 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
HOXD10P28358 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 AL136146.1-201ENST00000529830 1667 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXD10P28358 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXD10P28358 AC092701.1-201ENST00000623627 1551 ntBASIC8.14□□□□□ -1.11
HOXD10P28358 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXD10P28358 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD10P28358 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXD10P28358 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD10P28358 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD10P28358 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
HOXD10P28358 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD10P28358 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXD10P28358 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXD10P28358 AL023806.3-201ENST00000638502 2704 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms