Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
HLA-DOBP13765 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DOBP13765 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DOBP13765 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
HLA-DOBP13765 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOBP13765 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC015871.3-201ENST00000618835 2261 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC079178.2-201ENST00000439323 1624 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC125232.1-201ENST00000452554 1408 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 RNU4-81P-201ENST00000363561 144 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 RPL17P17-201ENST00000419491 557 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 CLIC4P3-201ENST00000422221 752 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AL121916.1-201ENST00000429405 308 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AF274573.1-201ENST00000430535 494 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 RBMY2AP-201ENST00000445405 1157 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 RBMY2CP-201ENST00000448575 1157 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 RBMY2DP-202ENST00000448881 1157 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 PRDX1P1-201ENST00000449329 596 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 PABPC1P10-201ENST00000464731 381 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 RN7SL797P-201ENST00000486314 297 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 RN7SL306P-201ENST00000492941 296 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC112225.1-201ENST00000508230 297 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 EEF1B2P1-201ENST00000567221 672 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC115989.2-201ENST00000578640 563 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC061975.3-201ENST00000583209 244 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 AL139041.1-201ENST00000605480 610 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC027271.1-201ENST00000610270 610 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 MIR6737-201ENST00000617385 70 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AL157762.1-201ENST00000619612 415 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 TSHZ2-205ENST00000626626 670 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 OR7E161P-202ENST00000641994 1033 ntBASIC6.37□□□□□ -1.39
HLA-DOBP13765 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOBP13765 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOBP13765 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 TPTE2P2-201ENST00000403471 1466 ntBASIC6.36□□□□□ -1.39
HLA-DOBP13765 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 AL117378.2-201ENST00000622916 1337 ntBASIC6.36□□□□□ -1.39
HLA-DOBP13765 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOBP13765 FAM204BP-201ENST00000369171 701 ntBASIC6.36□□□□□ -1.39
HLA-DOBP13765 RPL12P1-201ENST00000374520 498 ntBASIC6.36□□□□□ -1.39
HLA-DOBP13765 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 MIR1204-201ENST00000408388 67 ntBASIC6.36□□□□□ -1.39
HLA-DOBP13765 RNA5SP177-201ENST00000410122 107 ntBASIC6.36□□□□□ -1.39
HLA-DOBP13765 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOBP13765 AL157698.1-201ENST00000415190 1011 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms