Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LARP1P1-201ENST00000407692 292 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 MTND6P1-201ENST00000417434 424 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 GAPDHP69-201ENST00000425504 1008 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AL731892.1-201ENST00000437364 1192 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC114928.1-201ENST00000446516 415 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 CYCSP44-201ENST00000448560 313 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC005517.1-201ENST00000452091 489 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 RPL10P7-201ENST00000495649 625 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 NACAP6-201ENST00000509572 622 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC107952.1-201ENST00000524200 376 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 RN7SL178P-201ENST00000582930 304 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC097376.1-201ENST00000602907 997 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AL121809.2-201ENST00000613169 341 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC098590.2-201ENST00000614787 281 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC022743.1-201ENST00000624990 664 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SAMMSON-222ENST00000641901 2727 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 SNORA70.8-201ENST00000384231 136 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AL451061.1-201ENST00000407887 862 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 NPM1P36-201ENST00000415681 835 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 NPM1P30-201ENST00000425092 828 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AL356133.1-201ENST00000444762 372 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 RPL7L1P7-201ENST00000509986 724 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC137549.1-201ENST00000514243 533 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AP003084.1-201ENST00000524828 742 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 PHBP2-201ENST00000532859 806 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC091932.1-201ENST00000569381 427 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC027271.1-201ENST00000610270 610 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC091059.2-201ENST00000623355 614 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC006453.3-201ENST00000635891 377 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 AC006116.1-201ENST00000587908 2171 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.57□□□□□ -1.36
NPIPA3F8WFD2 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
NPIPA3F8WFD2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms