Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 PTBP1P-201ENST00000554374 1601 ntBASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 PNMA6B-201ENST00000538162 1200 ntBASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HRH3Q9Y5N1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 AL359736.2-201ENST00000621992 437 ntBASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
HRH3Q9Y5N1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 AC092368.3-202ENST00000574180 1591 ntBASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 RPS2P4-201ENST00000476944 856 ntBASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.4■□□□□ 0.54
HRH3Q9Y5N1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.39■□□□□ 0.54
HRH3Q9Y5N1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HRH3Q9Y5N1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HRH3Q9Y5N1 FEM1AP1-201ENST00000431297 1995 ntBASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 AC233263.1-201ENST00000578059 224 ntBASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 AP005212.1-201ENST00000581547 1997 ntBASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HRH3Q9Y5N1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms