Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 KRT8P36-201ENST00000489121 1440 ntBASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 AC138932.1-201ENST00000534164 6830 ntBASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.48■■□□□ 1.03
SSX2IPQ9Y2D8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 MIR2861-201ENST00000636310 90 ntBASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SSX2IPQ9Y2D8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 AC113410.3-201ENST00000623366 203 ntBASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSX2IPQ9Y2D8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SSX2IPQ9Y2D8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SSX2IPQ9Y2D8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.45■■□□□ 1.02
SSX2IPQ9Y2D8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 AL353807.1-201ENST00000427475 662 ntBASIC21.44■■□□□ 1.02
SSX2IPQ9Y2D8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms