Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4E1Q9UPM8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.76■□□□□ 0.91
AP4E1Q9UPM8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.76■□□□□ 0.91
AP4E1Q9UPM8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.76■□□□□ 0.91
AP4E1Q9UPM8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4E1Q9UPM8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
AP4E1Q9UPM8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 AC097658.1-201ENST00000475555 843 ntBASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 AC142086.2-201ENST00000569753 217 ntBASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4E1Q9UPM8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 KRT16P6-202ENST00000425692 1426 ntBASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.73■□□□□ 0.91
AP4E1Q9UPM8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 AL355802.2-201ENST00000402069 882 ntBASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 AC073210.2-201ENST00000430369 194 ntBASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 AC069152.1-201ENST00000438030 544 ntBASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4E1Q9UPM8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 AC083880.1-201ENST00000608266 535 ntBASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 AC133041.1-202ENST00000642053 222 ntBASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP4E1Q9UPM8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
AP4E1Q9UPM8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
AP4E1Q9UPM8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms