Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LETM1P2-201ENST00000597330 2178 ntBASIC17.78■□□□□ 0.44
COPS3Q9UNS2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 TREX1-205ENST00000625293 1783 ntBASIC17.77■□□□□ 0.44
COPS3Q9UNS2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 AL356652.1-201ENST00000615962 565 ntBASIC17.77■□□□□ 0.44
COPS3Q9UNS2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.77■□□□□ 0.44
COPS3Q9UNS2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.77■□□□□ 0.43
COPS3Q9UNS2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
COPS3Q9UNS2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 AC098818.2-201ENST00000564925 2320 ntBASIC17.76■□□□□ 0.43
COPS3Q9UNS2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 KRT19P1-201ENST00000405746 1186 ntBASIC17.76■□□□□ 0.43
COPS3Q9UNS2 AC097381.1-201ENST00000429019 1296 ntBASIC17.76■□□□□ 0.43
COPS3Q9UNS2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 MYCNOS-205ENST00000641950 531 ntBASIC17.76■□□□□ 0.43
COPS3Q9UNS2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 AC018445.3-201ENST00000624177 1945 ntBASIC17.76■□□□□ 0.43
COPS3Q9UNS2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.76■□□□□ 0.43
COPS3Q9UNS2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 AC087633.2-202ENST00000565166 1439 ntBASIC17.75■□□□□ 0.43
COPS3Q9UNS2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.75■□□□□ 0.43
COPS3Q9UNS2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms