Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB8Q9UN66 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB8Q9UN66 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHB8Q9UN66 AL135905.2-201ENST00000584934 1404 ntBASIC21.29■■□□□ 1
PCDHB8Q9UN66 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB8Q9UN66 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB8Q9UN66 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB8Q9UN66 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB8Q9UN66 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SNORA78-201ENST00000459373 127 ntBASIC21.28■■□□□ 1
PCDHB8Q9UN66 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB8Q9UN66 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB8Q9UN66 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB8Q9UN66 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB8Q9UN66 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB8Q9UN66 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB8Q9UN66 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB8Q9UN66 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHB8Q9UN66 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHB8Q9UN66 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 KRT16P5-201ENST00000455284 522 ntBASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB8Q9UN66 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 AP001412.1-201ENST00000608405 714 ntBASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 AL049637.2-201ENST00000641778 930 ntBASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB8Q9UN66 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB8Q9UN66 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms